BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029A09LP1|AL429003
(905 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1593 1700 0.0
>3x_Contig1593
Length = 10902
Score = 1700 bits (851), Expect = 0.0
Identities = 883/899 (98%), Gaps = 1/899 (0%)
Strand = Plus / Minus
Query: 7 agttcccaacgactgacaactcggttggatcgaatagtggtttaaacgtcagcgtggggc 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3510 agttcccaacgactgacaactcggttggatcgaatagtggtttaaacgtcagcgtggggc 3451
Query: 67 tatctaamaagactagtaacatgtcaaatacaaacagtgccagtatctataacaatgcga 126
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3450 tatctaaaaagactagtaacatgtcaaatacaaacagtgccagtatctataacaatgcga 3391
Query: 127 ataccacggaggtatcagataaacgctttttggatttgaagaagttgattgtggggcaaa 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3390 ataccacggaggtatcagataaacgctttttggatttgaagaagttgattgtggggcaaa 3331
Query: 187 atggaaacgaggttgggtccaactcatcagatatatcmmccccatctttmagttctcctt 246
||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 3330 atggaaacgaggttgggtccaactcatcagatatatcaaccccatctttaagttctcctt 3271
Query: 247 tggaattgactaatagtccccagtatgaagagatcttgtataacgctccaatggcatcag 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3270 tggaattgactaatagtccccagtatgaagagatcttgtataacgctccaatggcatcag 3211
Query: 307 ggtcatcgaatttggctatcacaggaagcagaagcaggtctaactccaacattaatacca 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3210 ggtcatcgaatttggctatcacaggaagcagaagcaggtctaactccaacattaatacca 3151
Query: 367 tccaaaactttttctcagggaatagcaaagctcctcgaagttcatttgacgaatcttcag 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3150 tccaaaactttttctcagggaatagcaaagctcctcgaagttcatttgacgaatcttcag 3091
Query: 427 ataatcgatccttcacgtcttctgagattaatgtatcthagagggttcctctacttagga 486
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3090 ataatcgatccttcacgtcttctgagattaatgtatctaagagggttcctctacttagga 3031
Query: 487 gagcttcaagtgctttgctgaggaaacgctcccttcgacaaagtgccgagaattcacctg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3030 gagcttcaagtgctttgctgaggaaacgctcccttcgacaaagtgccgagaattcacctg 2971
Query: 547 atgtmaatacgcggacttggcattgtatcaccaattaatgatttcaggatggcttcgttg 606
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2970 atgtaaatacg-ggacttggcattgtatcaccaattaatgatttcaggatggcttcgttg 2912
Query: 607 gacttggatgctattgctcgcttagacagtagaaacaagacahatctttttatcaataca 666
|||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||
Sbjct: 2911 gacttggatgctattgctcgcttagaaagtagaaacaagaaaaatctttttatcaataca 2852
Query: 667 aacgacagcagaccgacgctatcgtccaaggaatccacgacatctttacgatctacaatg 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2851 aacgacagcagaccgacgctatcgtccaaggaatccacgacatctttacgatctacaatg 2792
Query: 727 agtaatgatcctcatataamtmgaataccttcatttggttctaaagtgaaascgggattt 786
||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||
Sbjct: 2791 agtaatgatcctcatataaatagaataccttcatttggttctaaagtgaaacgcggattt 2732
Query: 787 acaagaatcatgagtagtgggaataactgttcaagaaaagaatcacctacaagttcaaga 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2731 acaagaatcatgagtagtgggaataactgttcaagaaaagaatcacctacaagttcaaga 2672
Query: 847 atactgagtgacaacatgctgaatggggattccaaagggaatgatgctgatgccattac 905
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2671 atactgagtgacaacatgctgaatgggaattccaaagggaatgatgctgatgccattac 2613
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5780
Number of Sequences: 1807
Number of extensions: 5780
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)